Human-gpDB
A database of human GPCRs, G-proteins, Effectors and their interactions
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Summary sheet information for Effector 'Tubulin-Homo sapiens-11'
Name
Tubulin-Homo sapiens-11
Description
RecName: Full=Tubulin beta-1 chain
Class
Family
Tubulins
Sub_family
Tubulins
type
Tubulin
Protein features link
Protein Information from Dasty2 DAS Client
GPCR, G-protein, Effector interaction
Visualizaton of GPCR, G-protein, Effector interaction at protein level
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Genes
Gene Location:
Chromosome
: 20
Gene Start
: 57027704
Gene End
: 57035104
Ensembl Contig View
Ensembl Genes:
ENSG00000101162
EMBL:
EMBL ID
Description
AJ292757
Homo sapiens TUBB1 gene for human beta tubulin 1, class VI
AL109840
Human DNA sequence from clone RP4-543J19 on chromosome 20 Contains the 3' end of the GNAS complex locus, the CTSZ gene for cathepsin Z, the ATP5E gene for ATP synthase (H+ transporting, mitochondrial F1 complex, epsilon subunit), the TH1L gene for TH1-like (Drosophila), the gene for tubulin beta 1 class VI (TUBB1), the C20orf45 gene encoding the CGI-107 protein (LOC51012) and four CpG islands.
BC033679
Homo sapiens tubulin, beta 1, mRNA (cDNA clone MGC:44928 IMAGE:5180793), complete cds.
EntrezGene:
ID
Description
TUBB1
tubulin, beta 1
RefSeq DNA:
ID
Description
NM_030773
Homo sapiens tubulin, beta 1 (TUBB1), mRNA.
UniGene:
ID
Description
Hs.303023
Transcribed locus
Hs.592143
Tubulin, beta 1, mRNA (cDNA clone MGC:44928 IMAGE:5180793)
Proteins
Ensembl Proteins:
ENSP00000217133
Entrez Proteins:
AAH33679.1
;
CAC09371.2
;
CAC16605.1
RefSeq Proteins:
ID
Description
NP_110400
beta tubulin 1, class VI [Homo sapiens].
UniProt:
ID
Description
Q9H4B7
RecName: Full=Tubulin beta-1 chain;
Domains
SMART:
- Hyperlink to SMART;
- Hyperlink to ENSEMBL
Tubulin-Homo sapiens-11
InterPro:
ID
Name
IPR003008
Tubulin_FtsZ
IPR000217
Tubulin
IPR008280
Tub_FtsZ_C
IPR013838
Beta-tubulin_BS
IPR002453
Beta_tubulin
Pfam:
ID
Description
Tubulin
Tubulin/FtsZ family, GTPase domain
Tubulin_C
Tubulin/FtsZ family, C-terminal domain
Structure
PDB:
ID
HSSP:
ID
Description
1ffx
STRUCTURAL PROTEIN
1jff
STRUCTURAL PROTEIN
1tub
MICROTUBULES
1tvk
CELL CYCLE, STRUCTURAL PROTEIN
1z5v
STRUCTURAL PROTEIN
1z5w
STRUCTURAL PROTEIN
2bto
CYTOSKELETAL PROTEIN
2btq
CYTOSKELETAL PROTEIN/COMPLEX
3cb2
STRUCTURAL PROTEIN, HYDROLASE
PSSH:
ID
Description
Diseases
OMIM:
OMIM ID
Name
Alt Name
Gene Ontology
GO:
GO ID
Description
GO:0000166
nucleotide binding
GO:0003924
GTPase activity
GO:0005198
structural molecule activity
GO:0005200
structural constituent of cytoskeleton
GO:0005525
GTP binding
GO:0005737
cytoplasm
GO:0005874
microtubule
GO:0007017
microtubule-based process
GO:0007018
microtubule-based movement
GO:0043234
protein complex
GO:0051225
spindle assembly
GO:0051258
protein polymerization
Pathway
KEGG:
KEGG PATHWAY ID
Name
hsa04540
Gap junction
hsa05130
Pathogenic Escherichia coli infection
Panther:
ID
Description
P00016
Cytoskeletal regulation by Rho GTPase
P00029
Huntington disease
Chemicals
DrugBank:
ID
Name
Synonyms
DB03010
Epothilone B
EPO 906; EPO906; patupilone
DB01248
Docetaxel
Docetaxel anhydrous; Docetaxel, Trihydrate; TXL; docetaxel
DB01229
Paclitaxel
7-Epipaclitaxel; 7-Epitaxol; 7-epi-Paclitaxel; 7-epi-Taxol
DB01873
Epothilone D
KOS-862; epothilone D
DB00309
Vindesine
Desacetylvinblastine Amide Sulfate; Vindesine Sulfate
DB01394
Colchicine
Colchicin; Colchicina; Colchicinum
HMDB:
ID
Name
Synonyms
Orthology
Orthology Relations:
Gene
Gene Description
Organism
Orthology type
Orthologs
Orthologs Description
ENSG00000101162
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7]
Pan_troglodytes
one2one
ENSPTRG00000013680
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]TUBB1
Pongo_pygmaeus
one2one
ENSPPYG00000011180
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Macaca_mulatta
one2one
ENSMMUG00000013187
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Microcebus_murinus
one2one
ENSMICG00000014890
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Tarsius_syrichta
one2one
ENSTSYG00000012530
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Otolemur_garnettii
one2one
ENSOGAG00000013378
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Tupaia_belangeri
one2one
ENSTBEG00000009258
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Oryctolagus_cuniculus
one2one
ENSOCUG00000015969
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Cavia_porcellus
one2one
ENSCPOG00000012388
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Myotis_lucifugus
one2one
ENSMLUG00000014902
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Spermophilus_tridecemlineatus
one2one
ENSSTOG00000010925
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Dasypus_novemcinctus
one2one
ENSDNOG00000010771
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Ochotona_princeps
one2one
ENSOPRG00000002529
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Loxodonta_africana
one2one
ENSLAFG00000000296
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Mus_musculus
one2one
ENSMUSG00000016255
tubulin, beta 1 [Source:RefSeq_peptide;Acc:NP_001074440][hgnc]Tubb1
Tursiops_truncatus
one2one
ENSTTRG00000008404
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Pteropus_vampyrus
one2one
ENSPVAG00000000207
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Sorex_araneus
one2one
ENSSARG00000004580
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Bos_taurus
one2one
ENSBTAG00000018785
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]TUBB1
Erinaceus_europaeus
one2one
ENSEEUG00000003608
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Equus_caballus
one2one
ENSECAG00000025099
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Canis_familiaris
one2one
ENSCAFG00000012194
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]TUBB1
Procavia_capensis
one2one
ENSPCAG00000003842
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]
Dipodomys_ordii
one2one
ENSDORG00000014668
tubulin, beta 1 [Source:RefSeq_peptide;Acc:NP_001074440][hgnc]
Ornithorhynchus_anatinus
one2one
ENSOANG00000009278
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]100080473
Monodelphis_domestica
one2one
ENSMODG00000016603
Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9H4B7][hgnc]