Human-gpDB
A database of human GPCRs, G-proteins, Effectors and their interactions
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Summary sheet information for Effector 'Tubulin-Homo sapiens-16'
Name
Tubulin-Homo sapiens-16
Description
RecName: Full=Tubulin beta-4 chain;AltName: Full=Tubulin 5 beta
Class
Family
Tubulins
Sub_family
Tubulins
type
Tubulin
Protein features link
Protein Information from Dasty2 DAS Client
GPCR, G-protein, Effector interaction
Visualizaton of GPCR, G-protein, Effector interaction at protein level
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Genes
Gene Location:
Chromosome
: 19
Gene Start
: 6445331
Gene End
: 6453330
Ensembl Contig View
Ensembl Genes:
ENSG00000104833
EMBL:
EMBL ID
Description
BC006570
Homo sapiens tubulin, beta 4, mRNA (cDNA clone MGC:4270 IMAGE:3603726), complete cds.
BC013683
Homo sapiens tubulin, beta 4, mRNA (cDNA clone MGC:18193 IMAGE:4155617), complete cds.
X00734
Human beta-tubulin gene (5-beta) with ten Alu family members
EntrezGene:
ID
Description
TUBB4
tubulin, beta 4
RefSeq DNA:
ID
Description
NM_006087
Homo sapiens tubulin, beta 4 (TUBB4), mRNA.
UniGene:
ID
Description
Hs.110837
CDNA FLJ90826 fis, clone Y79AA1001530, highly similar to Tubulin beta-4 chain
Proteins
Ensembl Proteins:
ENSP00000264071
Entrez Proteins:
AAH06570.1
;
AAH13683.1
;
CAA25318.1
RefSeq Proteins:
ID
Description
NP_006078
tubulin, beta 4 [Homo sapiens].
UniProt:
ID
Description
P04350
RecName: Full=Tubulin beta-4 chain; AltName: Full=Tubulin 5 beta;
Domains
SMART:
- Hyperlink to SMART;
- Hyperlink to ENSEMBL
Tubulin-Homo sapiens-16
InterPro:
ID
Name
IPR003008
Tubulin_FtsZ
IPR000217
Tubulin
IPR008280
Tub_FtsZ_C
IPR013838
Beta-tubulin_BS
IPR002453
Beta_tubulin
Pfam:
ID
Description
Tubulin
Tubulin/FtsZ family, GTPase domain
Tubulin_C
Tubulin/FtsZ family, C-terminal domain
Structure
PDB:
ID
HSSP:
ID
Description
1z2b
CELL CYCLE
1z5v
STRUCTURAL PROTEIN
1z5w
STRUCTURAL PROTEIN
2btq
CYTOSKELETAL PROTEIN/COMPLEX
3cb2
STRUCTURAL PROTEIN, HYDROLASE
3e22
CELL CYCLE
PSSH:
ID
Description
Diseases
OMIM:
OMIM ID
Name
Alt Name
602662
TUBULIN, BETA-4; TUBB4
TUBB5
Gene Ontology
GO:
GO ID
Description
GO:0000166
nucleotide binding
GO:0003924
GTPase activity
GO:0005198
structural molecule activity
GO:0005525
GTP binding
GO:0005737
cytoplasm
GO:0005874
microtubule
GO:0005929
cilium
GO:0007017
microtubule-based process
GO:0007018
microtubule-based movement
GO:0033269
internode region of axon
GO:0042995
cell projection
GO:0043025
cell soma
GO:0043209
myelin sheath
GO:0043234
protein complex
GO:0051258
protein polymerization
Pathway
KEGG:
KEGG PATHWAY ID
Name
hsa04540
Gap junction
hsa05130
Pathogenic Escherichia coli infection
Panther:
ID
Description
P00016
Cytoskeletal regulation by Rho GTPase
P00029
Huntington disease
Chemicals
DrugBank:
ID
Name
Synonyms
DB03010
Epothilone B
EPO 906; EPO906; patupilone
DB01873
Epothilone D
KOS-862; epothilone D
HMDB:
ID
Name
Synonyms
Orthology
Orthology Relations:
Gene
Gene Description
Organism
Orthology type
Orthologs
Orthologs Description
ENSG00000104833
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350]
Pan_troglodytes
one2one
ENSPTRG00000010369
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]TUBB4
Canis_familiaris
one2one
ENSCAFG00000018634
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]TUBB4
Pteropus_vampyrus
one2one
ENSPVAG00000007258
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]
Tursiops_truncatus
one2one
ENSTTRG00000007829
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]
Equus_caballus
one2one
ENSECAG00000013659
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]LOC100065776
Bos_taurus
one2one
ENSBTAG00000021013
Tubulin beta-4 chain. [Source:UniProtKB/Swiss-Prot;Acc:Q3ZBU7][hgnc]TUBB4
Ochotona_princeps
one2one
ENSOPRG00000017153
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]
Cavia_porcellus
one2one
ENSCPOG00000003237
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]
Otolemur_garnettii
one2one
ENSOGAG00000015296
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]
Mus_musculus
one2one
ENSMUSG00000062591
Tubulin beta-4 chain [Source:UniProtKB/Swiss-Prot;Acc:Q9D6F9][hgnc]Tubb4
Ornithorhynchus_anatinus
one2one
ENSOANG00000008406
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]
Gasterosteus_aculeatus
one2many
ENSGACG00000018863
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]
Gasterosteus_aculeatus
one2many
ENSGACG00000010471
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]
Danio_rerio
one2many
ENSDARG00000038198
hypothetical protein LOC767746 [Source:RefSeq_peptide;Acc:NP_001070183][hgnc]zgc:153426
Takifugu_rubripes
one2one
ENSTRUG00000012675
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]
Oryzias_latipes
one2one
ENSORLG00000007053
Tubulin beta-4 chain (Tubulin 5 beta) [Source:UniProtKB/Swiss-Prot;Acc:P04350][hgnc]
Danio_rerio
one2many
ENSDARG00000016301
hypothetical protein LOC335798 [Source:RefSeq_peptide;Acc:NP_956269][hgnc]zgc:65894
Xenopus_tropicalis
one2one
ENSXETG00000021860
Hypothetical protein. [Source:UniProtKB/TrEMBL;Acc:Q5BL39][hgnc]
Drosophila_melanogaster
many2many
FBgn0003889
[hgnc]betaTub85D
Drosophila_melanogaster
many2many
FBgn0003887
[hgnc]betaTub56D
Anopheles_gambiae
one2many
AGAP010929
[hgnc]AgaP_ENSANGG00000010545
Aedes_aegypti
one2many
AAEL002851
tubulin beta chain[hgnc]
Ciona_savignyi
one2one
ENSCSAVG00000009381
[hgnc]
Ciona_intestinalis
one2one
ENSCING00000006957
[hgnc]
Saccharomyces_cerevisiae
one2many
YFL037W
Tubulin beta chain (Beta-tubulin). [Source:UniProtKB/Swiss-Prot;Acc:P02557][hgnc]TUB2